came.utils.plot.embed_with_values

came.utils.plot.embed_with_values(xy: ndarray, values: Series | Mapping, do_zscore: bool = False, s: int | None = 1.5, ncols=5, axscale=2.5, name_xy='UMAP', with_cbar=True, cmap='RdYlBu_r', vmin=None, vmax=None, **kwargs)

Visualize the given x-y coordinates, colored by the given (dict of) values

Parameters:

• xy (np.array) – coordinates of each points, of shape (n_points, 2)

• values (Mapping, pd.DataFrame or pd.Series) – where the keys will be the title of subplots and each of the values should be a vector of the length equal to xy.shape[0]

• do_zscore – whether to calculate and display the z-scores instead of the original values. (False)

• s – the size of the scatters / points (1.5)

• ncols – the number of columns for multiple-subplots (5)

• axscale – adjust the size of the figures (2.5)

• with_cbar – whether to display the color bars (True)

• cmap – the colormap

• vmin – the minimum and the maximum of the values

• vmax – the minimum and the maximum of the values

• kwargs – Other Parameters for sorted_scatter