Index

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__init__() (swnn.Builder method)

A

adaptive_tree() (in module swnn) (in module swnn.graph2tree)

agg_group_edge_props() (in module swnn.graph2tree) agg_group_edges() (in module swnn.graph2tree) approx_knn() (in module swnn.multipartite_graph)

B

build_graph() (swnn.builder.Builder method) build_tree() (swnn.builder.Builder method)

Builder (class in swnn) (class in swnn.builder)

C

change_names() (in module swnn) (in module swnn.utils.process) check_dirs() (in module swnn) (in module swnn.utils.process)

connect (swnn.builder.Builder property) connect_bin (swnn.builder.Builder property) connect_near_stages() (in module swnn.graph2tree)

D

describe_dataframe() (in module swnn) (in module swnn.utils.process)

describe_series() (in module swnn.utils.process) distmat (swnn.builder.Builder property)

E

edgedf (swnn.builder.Builder property)

F

find_children() (in module swnn.graph2tree)

G

group_lbs (swnn.builder.Builder property) group_mean() (in module swnn) (in module swnn.utils.process) group_mean_adata() (in module swnn) (in module swnn.utils.process)

group_mean_dense() (in module swnn.utils.process) group_median_dense() (in module swnn.utils.process) groupwise_hvgs_freq() (in module swnn) (in module swnn.utils.process)

L

label_binarize_each() (in module swnn.utils.process)

M

make_binary() (in module swnn.utils.process) make_children_dict() (in module swnn.graph2tree) make_stage_group_dict() (in module swnn.graph2tree) max_connection() (in module swnn.graph2tree) module swnn, [1] swnn.builder swnn.graph2tree swnn.multipartite_graph swnn.utils swnn.utils.process

N

normalize_default() (in module swnn) (in module swnn.utils.process)

normalize_log_then_total() (in module swnn.utils.process)

P

pca_transform() (in module swnn.multipartite_graph)

Q

quick_preprocess_raw() (in module swnn) (in module swnn.utils.process)

R

refined_group_lbs (swnn.builder.Builder property)

reverse_dict() (in module swnn.utils.process)

S

set_adata_hvgs() (in module swnn) (in module swnn.utils.process) set_precomputed_neighbors() (in module swnn) (in module swnn.utils.process) stage_lbs (swnn.builder.Builder property) stagewise_knn() (in module swnn) (in module swnn.multipartite_graph) swnn module, [1]

swnn.builder module swnn.graph2tree module swnn.multipartite_graph module swnn.utils module swnn.utils.process module

T

take_high_freq_elements() (in module swnn.utils.process)

W

wrapper_scale() (in module swnn)